Figure 3. Boxplot distributions analysis of fruit color phenotype (R/B) by genotypes of significant GWAS SNPs from this study. Samples were classified into three group: (a ) all 188 samples group, (b ) wild type VIR group: samples with VIR+/VIR+ or VIR+/VIRsaf (n=25) and (c ) VIRIM group: samples with VIRIM/VIRIM genotype (n=61) and then further separated by genotypes of significant SNPs identified in this study. P-values were calculated using by Wilcoxon statistical test. The X-axis represents the SNP’s genotypes, and Y-axis represents R/B phenotypic value. Results show significant association with fruit color even when samples are separated by the VIR genotypes associated with red/yellow fresh fruit color.